CDS

Accession Number TCMCG027C08241
gbkey CDS
Protein Id XP_018858379.2
Location join(8204090..8204194,8204303..8204485,8204579..8204848,8204996..8205163,8205389..8205449,8206062..8206138,8206236..8206493,8206951..8207040,8207182..8207316,8207579..8207728,8208545..8208648,8208920..8208973,8209057..8209147,8209321..8209401,8209471..8209539)
Gene LOC109020383
GeneID 109020383
Organism Juglans regia

Protein

Length 631aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA350852
db_source XM_019002834.2
Definition tyrosyl-DNA phosphodiesterase 1 isoform X2 [Juglans regia]

EGGNOG-MAPPER Annotation

COG_category L
Description Tyrosyl-DNA phosphodiesterase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10862        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000012        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008081        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0017005        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070259        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTGCTCGATTTTCTCCGTTTCCCCAACGATACCCTTCCAAAATCCTCTCCGGGGCTCTTTCGATCTCATGCTACCAAGCATTCTCTAATGGCTCAGTCTCAGATTGGATATTTGGTTCCGCTTATTCAAAATCTTGTCGAAGACGCTTCAATCCCAAAGCTCACCCTCTCTGAAGGCGCAAACTTGATTGGCCGCAACAACCTCCCAGTGCCCGACAAGCGGCTCAGCCGCAAGCACATCACTCTAACCGCTTCCGCCGATGGCTCCTCCGCCAACTTGTTTGTGGAGGGTACGAATCCCATTGTGATCAATTCCGGGAATAAGAGAAGGAAGCTGTGTTCTCAAGAAAGCGCTACCATTTCAGACGGTGCTATTATAGAGCTGATTCCAGGGCATCATTTTTTCAAGTACGTATCGTCGGGTGGCGACGAAAACGCACCTTTGCGTCAGACCCATAAGAGGAATGAAGCAAGAGAGTTCGGTAAAGGAGAGGAACCATGTCGAAGGAGGCCGCATCAAACGTCTGAACGCATATCCTTTGGTACCAAATCTCAGATTGGAAATTCAGGGCACTCCCAGTCTAAGGGAGAGAGTAATGAGATGGCTATCCGACATTTTCATGTCTCTAATGATAAGTTACCTTGGACTTTTCGGCTCTTGCAAGTGAAAGAGCTGCCAGCATGGGCAAACACCTCTTGTGTTTCATTAAGTGATGTGATTCAGGGGGATATTCTCATCGCTATCCTTTCAAATTACATGGTAGACATCGACTGGTTGTTACCTGCATGTCCAGCACTTGGAAAAATCCCTCATGTATTGGTAGTTCATGGAGAAGGTGATGGCACATTGGATCATATGAAGAGAAATAAGCCTGCAAACTGGATTCTGCATAAACCACCCTTACCTATTTCATTTGGGACTCACCATTCAAAGGCCATGATTCTTGTCTATCCTAAGGGAGTGAGGATTATTGTACACACAGCAAATTTAATATATGTAGATTGGAACAACAAAAGTCAAGGTTTGTGGATGCAAGACTTCCCATGGAAAGATCAAAATAGCCCAAGCAAAGGGTGTGGATTTGAAAATGACTTGATTGATTATCTCAGTGCCTTGAAGTGGCCTGAATTCTGTGTCAAATTACCAGCCCTTGGAAACTTCAATATCAATCCAACTTTCTTTAGGAAGTTTGATTATAGCAATGCGGCGGTCAGATTGATTGCATCTGTTCCTGGATATCACAGGGGTACCAATCTGAAGAAGTGGGGACACATGAAGCTACGAACTGTTCTCCAGGAGTGTACTTTTGATAAAGAATTTAAAAAGTCCCCACTTGCTTATCAGTTCTCTTCCCTCGGTTCTTTGGATGAGAAGTGGCTGGCTGAGCTGGCTTCCTCCATGTCATCGGGCTTCTCAGAAGATAAAACACCACTTGGTCTTGGGGAACCATGCATTATATGGCCTACTGTGGAAGATGTCAGATGCTCTTTAGAGGGTTATGCAGCTGGAAATGCCATTCCAAGTCCACTGAAGAATGTGGAGAAAGAATTCTTGAAGAAGTATTGGGCAAAGTGGAGGGCAGGCCACACCGGTCGCTGTCGTGCAATGCCACATATAAAGACATACACCCGGTATAATGGTCAGCAACTTGCTTGGTTTTTGCTGACTTCAGCAAATCTTAGCAAAGCTGCCTGGGGAGCCCTCCAGAAAAATAATACTCAGTTGATGATCCGATCTTATGAGCTAGGAGTGCTGTTTTTACCATCTTCTACTGAAAGACACGGTTCTGAATTTTCTTGTACAAGTAATGGTGATGTAATGGAGAGTGTGGGTGGGAAGAATCTTGGCCAAAAGAAAGTTTCTGTGAGTTTCAGGATAAGAGCAGATTATTAG
Protein:  
MLLDFLRFPNDTLPKSSPGLFRSHATKHSLMAQSQIGYLVPLIQNLVEDASIPKLTLSEGANLIGRNNLPVPDKRLSRKHITLTASADGSSANLFVEGTNPIVINSGNKRRKLCSQESATISDGAIIELIPGHHFFKYVSSGGDENAPLRQTHKRNEAREFGKGEEPCRRRPHQTSERISFGTKSQIGNSGHSQSKGESNEMAIRHFHVSNDKLPWTFRLLQVKELPAWANTSCVSLSDVIQGDILIAILSNYMVDIDWLLPACPALGKIPHVLVVHGEGDGTLDHMKRNKPANWILHKPPLPISFGTHHSKAMILVYPKGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKDQNSPSKGCGFENDLIDYLSALKWPEFCVKLPALGNFNINPTFFRKFDYSNAAVRLIASVPGYHRGTNLKKWGHMKLRTVLQECTFDKEFKKSPLAYQFSSLGSLDEKWLAELASSMSSGFSEDKTPLGLGEPCIIWPTVEDVRCSLEGYAAGNAIPSPLKNVEKEFLKKYWAKWRAGHTGRCRAMPHIKTYTRYNGQQLAWFLLTSANLSKAAWGALQKNNTQLMIRSYELGVLFLPSSTERHGSEFSCTSNGDVMESVGGKNLGQKKVSVSFRIRADY